Molecular biology databases
- MedDB.info
Medizinische und molekularbiologische Datenbanken
- Universal Protein Resource (UniProt)
Protein sequence database consiting of Swiss-Prot knowledgebase and translated EMBL
- ENA - European Nucleotide Archive formerly known as EMBL
- Submissions to databases @ EBI
Submission of entries to European Nucleotide Archive, UniProt, and other databases
- Ensembl Genomes @ EMBL-EBI
- Codon Usage Database
- Intergrated Protein Resource (InterPro)
Database of protein families, domains and functional sites that integrates data from several protein family databases
- InterPro member databases
a list of databases (most of them protein family databases) that are used to build the InterPro database
- Pfam - Protein family database of sequence alignments and hidden Markov models
Cosists of protein family definitions based on manually compiled alignments (PfamA) and an automatically generated supplement (PfamB)
- Structural Classification of Proteins (SCOP)
Classification of PDB entries into class, fold, superfamily, and family by manual inspection and automated methods
- CATH Protein Structure Classification
Hierarchical classification of protein domain structures into four major levels, Class, Architecture, Topology and Homologous superfamily
- AllFam - The Database of Allergen Families
- Enzyme Nomenclature Database
- CAZy- Carbohydrate-Active enZymes
The CAZy database describes the families of structurally-related catalytic and carbohydrate-binding modules (or functional domains) of enzymes that degrade, modify, or create glycosidic bonds.
- MEROPS - the Peptidase Database
Database of families and clans of proteases and protease inhibitors
- NCBI Taxonomy Database
- Uniprot taxonomy browser
- Integrated Taxonomic Information System (ITIS)
- Tree of Life