@article{rouha2012alternative,
title = {Alternative housing systems for fattening bulls under Austrian conditions with special respect to rubberised slatted floors},
author = {Rouha-Muelleder, C. and Absmanner, E. and Kahrer, E. and Zeiner, H. and Scharl, T. and Leisch, F. and Stanek, C. and Troxler, J.},
journal = {Animal Welfare-The UFAW Journal},
volume = {21},
number = {1},
pages = {113--126},
year = {2012}
}
@article{honeder2012improvement,
title = {Improvement of replication fidelity by certain mesalazine derivatives.},
author = {Honeder, C. and Campregher, C. and Zens, B. and Scharl, T. and Gasche, C.},
journal = {International journal of oncology},
volume = {40},
number = {5},
pages = {1331:1338},
year = {2012}
}
@article{bg-papers:Gruen+Scharl+Leisch:2012,
author = {Bettina Gr{\" u}n and Theresa Scharl and Friedrich
Leisch},
title = {Modelling Time Course Gene Expression Data with
Finite Mixtures of Linear Additive Models},
year = 2012,
journal = {Bioinformatics},
volume = 28,
number = 2,
month = jan,
pages = {222--228},
doi = {10.1093/bioinformatics/btr653}
}
@article{campregher2010nucleotide,
title = {The nucleotide composition of microsatellites impacts both replication fidelity and mismatch repair in human colorectal cells},
author = {Campregher, C. and Scharl, T. and Nemeth, M. and Honeder, C. and Jascur, T. and Boland, C.R. and Gasche, C.},
journal = {Human molecular genetics},
volume = {19},
number = {13},
pages = {2648--2657},
year = {2010},
publisher = {Oxford Univ Press}
}
@article{bg-papers:Scharl+Gruen+Leisch:2010,
author = {Theresa Scharl and Bettina Gr{\" u}n and Friedrich
Leisch},
title = {Mixtures of Regression Models for Time-Course Gene
Expression Data: Evaluation of Initialization and
Random Effects},
year = 2010,
journal = {Bioinformatics},
volume = 26,
number = 3,
pages = {370--377},
month = feb,
doi = {10.1093/bioinformatics/btp686},
preprinturl = {http://epub.ub.uni-muenchen.de/11242/}
}
@inproceedings{e1071-papers:Scharl+Leisch:2010,
author = {Theresa Scharl and Friedrich Leisch},
title = {Quality--Based Clustering of Functional Data: Applications to Time Course Microarray Data},
booktitle = {Advances in Data Analysis, Data Handling and Business Intelligence, Proceedings of the 32nd Annual Conference of the Gesellschaft f{\"u}r Klassifikation e.V., Joint Conference with the British Classification Society (BCS) and the Dutch/Flemish Classification Society (VOC), Helmut--Schmidt--University, Hamburg, July 16--18, 2008},
series = {Studies in Classification, Data Analysis, and Knowledge Organization},
editor = {A. Fink and B. Lausen and W. Seidel and A.T. Ultsch},
publisher = {Springer Verlag},
year = 2010,
pages = {675--684}
}
@article{e1071-papers:Schosser+Fuchs+Scharl:2010,
author = {Alexandra Schosser and Karoline Fuchs and Theresa Scharl
and Monika Schloegelhofer and Jochen Kindler and
Nilufar Mossaheb and Rainer M. Kaufmann and Friedrich
Leisch and Siegfried Kasper and Werner Sieghart and Harald
N. Aschauer},
title = {Interaction between Serotonin {5-HT2A} Receptor Gene and
Dopamine Transporter ({DAT1}) Gene Polymorphisms Influences
Personality Trait of Persistence in Austrian Caucasians},
journal = {World J Biol Psychiatry},
year = 2010,
volume = {11(2 Pt 2)},
pages = {417--24}
}
@phdthesis{e1071-theses:Scharl:2009,
author = {Theresa Scharl},
title = {Analysis of Gene Expression Time-Course Data Using Cluster Techniques},
school = {Institut f{\"u}r Statistik und Wahrscheinlichkeitstheorie, Technische Universit{\"a}t Wien},
year = 2009,
month = {September},
note = {Friedrich Leisch, advisor}
}
@article{e1071-papers:Scharl+Voglhuber+Leisch:2009,
author = {Theresa Scharl and Ingo Voglhuber and Friedrich Leisch},
title = {Exploratory and inferential analysis of gene cluster neighborhood graphs},
journal = {BMC Bioinformatics},
volume = {10},
year = {2009},
number = {1},
pages = {288},
url = {http://www.biomedcentral.com/1471-2105/10/288},
doi = {10.1186/1471-2105-10-288},
pubmedid = {19751523},
issn = {1471-2105}
}
@article{e1071-papers:Scharl+Striedner:2009,
author = {Theresa Scharl and Gerald Striedner and Florentina P{\"o}tschacher and Friedrich Leisch and Karl Bayer},
title = {Interactive visualization of clusters in microarray data: an efficient tool for improved metabolic analysis of {E.~coli}},
journal = {Microbial Cell Factories},
year = 2009,
volume = 8,
pages = {37}
}
@article{e1071-papers:Scharl+Leisch:2009,
author = {Theresa Scharl and Friedrich Leisch},
title = {{gcExplorer}: Interactive Exploration of Gene Clusters},
journal = {Bioinformatics},
year = 2009,
volume = 25,
number = 8,
pages = {1089--1090},
doi = {10.1093/bioinformatics/btp099}
}
@article{e1071-papers:Absmanner:2009,
author = {Evelin Absmanner and Cornelia Rouha-M{\"u}lleder and Theresa Scharl and Friedrich Leisch and Josef Troxler},
title = {Effects of different housing systems on the behaviour of beef bulls - {An} on-farm assessment on Austrian farms},
journal = {Applied Animal Behaviour Science},
year = 2009,
volume = 118,
pages = {12--19}
}
@inproceedings{e1071-papers:Scharl+Leisch:2008,
author = {Theresa Scharl and Friedrich Leisch},
title = {Visualizing Gene Clusters Using Neighborhood Graphs in R},
booktitle = {Proceedings of COMPSTAT'2008, International Conference on Computational Statistics, Porto - Portugal, August 24th-29th 2008},
pages = {51 --58},
editor = {Paula Brito},
publisher = {Physica--Verlag},
year = 2008
}
@inproceedings{e1071-papers:Scharl+Leisch:2008a,
author = {Theresa Scharl and Friedrich Leisch},
title = {Using Neighborhood Graphs for the Investigation of {E.~coli} Gene Clusters},
booktitle = {Proceedings of the 5th International Workshop on Computational Systems Biology, WCSB 2008 (June 11-13, 2008, Leipzig, Germany)},
pages = {157--160},
editor = {Mikka Ahdesm{\"a}ki and Korbinian Strimmer and Nicole Radde and J{\"o}rg Rahnenf{\"u}hrer and Konstantin Klemm and Harri L{\"a}hdesm{\"a}ki and Olli Yli-Harja},
publisher = {Tampere University of Technology, Tampere, Finland},
year = 2008
}
@article{e1071-papers:Schmied+Waiblinger+Scharl+Leisch:2007,
author = {Claudia Schmied and Susanne Waiblinger and Theresa Scharl and
Friedrich Leisch and Xavier Boivin},
title = {Stroking of different body regions by a human: Effects on behaviour
and heart rate of dairy cows},
journal = {Applied Animal Behaviour Science},
year = 2008,
month = jan,
volume = 109,
number = 1,
pages = {25--38}
}
@article{e1071-papers:Schosser+Fuchs+Scharl+Leisch:2007,
author = {Alexandra Schosser and Karoline Fuchs and Theresa Scharl and
Friedrich Leisch and Ursula Bailer and Siegfried Kasper and Werner Sieghart
and Kurt Hornik and Harald N. Aschauer},
title = {Additional support for linkage of schizophrenia and bipolar disorder to
chromosome 3q29},
journal = {Eur. Neuropsychopharmacol.},
year = 2007,
volume = 17,
number = {6--7},
pages = {501--5}
}
@article{e1071-papers:Schosser+Fuchs+Scharl:2007a,
author = {Alexandra Schosser and Karoline Fuchs and Theresa Scharl
and Monika Schloegelhofer and Jochen Kindler and Friedrich
Leisch and Siegfried Kasper and Werner Sieghart and Harald
N. Aschauer},
title = {Trend for Association of Homozygous Variants of {DAT1}
with Novelty-Seeking in Healthy Individuals},
journal = {The World Journal of Biological Psychiatry},
year = 2007,
volume = 8,
number = {Supplement 1},
pages = {166--167},
note = {Abstract}
}
@inproceedings{e1071-papers:Scharl+Leisch:2006a,
author = {Theresa Scharl and Friedrich Leisch},
title = {Jackknife distances for clustering time--course gene expression data},
booktitle = {2006 JSM Proceedings},
pages = {346--353},
publisher = {American Statistical Association, Alexandria, USA},
isbn = {978--0--9791747--2--8},
year = 2006
}
@inproceedings{e1071-papers:Scharl+Leisch:2006,
author = {Theresa Scharl and Friedrich Leisch},
title = {The stochastic QT--clust algorithm: evaluation of stability and variance on time--course microarray data},
booktitle = {Compstat 2006---Proceedings in Computational
Statistics},
pages = {1015--1022},
editor = {Alfredo Rizzi and Maurizio Vichi},
publisher = {Physica Verlag, Heidelberg, Germany},
isbn = {3-7908-1708-2},
year = 2006
}
@article{e1071-papers:Pollak+John+Scharl:2006,
author = {Daniela D. Pollak and Julius John and Theresa Scharl and Friedrich Leisch and Angela Schneider and Harald Hoeger and Gert Lubec},
title = {Strain-Dependent Regulation of Neurotransmission and Actin-remodelling Proteins in the Mouse Hippocampus},
journal = {Genes, Brain \& Behavior},
year = 2006,
volume = 5,
number = 2,
pages = {200--204}
}
@article{e1071-papers:Bilban+Heintel+Scharl:2006,
author = {Martin Bilban and Daniel Heintel and Theresa Scharl and Thomas Woelfel and Michael M. Auer and E. Porpaczy and Birgit Kainz and Alexander Kr{\"o}ber and Vince J. Carey and Medhat Shehata and Christoph Zielinski amd Winfried Pickl and Stephan Stilgenbauer and Alexander Gaiger and Oswald Wagner and Ulrich J{\"a}ger and the German CLL Study Group},
title = {Deregulated expression of fat and muscle genes in B-cell chronic lymphocytic leukemia with high lipoprotein lipase expression},
journal = {Leukemia},
year = 2006,
volume = 20,
page = {1080--1088}
}
@article{e1071-papers:Pollak+Scharl+Leisch:2005,
author = {Daniela D. Pollak and Theresa Scharl and Friedrich Leisch and Kurt Herkner and Santiago R. Villar and Harald Hoeger and Gert Lubec},
title = {Strain-Dependent Regulation of Plasticity-Related Proteins in the Mouse Hippocampus},
journal = {Behavioural Brain Research},
year = 2005,
volume = 165,
number = 2,
pages = {240--246}
}
@mastersthesis{e1071-theses:Scharl:2004,
author = {Theresa Scharl},
title = {A Selection of Analysis Methods for High and Low Density Microarray Data},
school = {Institut f{\"u}r Statistik und Wahrscheinlichkeitstheorie, Technische Universit{\"a}t Wien},
year = 2004,
note = {Karl Grill and Friedrich Leisch, advisors}
}
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